Metagenomics Market Size & Share Analysis - Growth Trends & Forecasts (2025 - 2030)

Metagenomics Market Report is Segmented by Product (Sequencing and Data Analytics Services, Kits and Reagents, and Other Products), Technology (Sequencing Driven and Function Driven), Application (Human Health, Environmental, and Other Applications), and Geography (North America, Europe, Asia-Pacific, Middle East and Africa, and South America). The Report Offers the Value (USD) for the Above Segments.

Metagenomics Market Size

Metagenomics Market Summary

Metagenomics Market Analysis

The Metagenomics Market size is estimated at USD 3.28 billion in 2025, and is expected to reach USD 6.49 billion by 2030, at a CAGR of 14.64% during the forecast period (2025-2030).

  • The metagenomics market is an emerging and dynamic segment within the life sciences industry, primarily focused on analyzing genetic material directly recovered from environmental samples. This field has garnered significant attention due to its profound ability to explore microbial diversity, enhance pathogen detection, and unravel the roles of microorganisms across various environments. The integration of advanced techniques such as next-generation sequencing (NGS) and sophisticated bioinformatics tools has broadened the applications of metagenomics, impacting sectors such as human health, environmental studies, and microbial ecology.
  • Technological Advancements in Sequencing: One of the primary drivers of the metagenomics market is the continuous decline in sequencing costs. Advances in sequencing technologies, particularly next-generation sequencing (NGS), have made high-throughput sequencing more accessible and affordable. This trend has significantly expanded the reach of metagenomics, enabling a wider range of research institutions and companies to engage in large-scale metagenomic studies.
  • Rising Research and Development (R&D) Expenditure: The increasing investment in R&D is another critical factor driving market growth. Governments, academic institutions, and private companies are allocating substantial resources to metagenomic research, recognizing its potential to offer insights into microbial ecosystems. The growing interest in the microbiome's role in health, disease, and environmental monitoring fuels this investment, driving demand for advanced metagenomic sequencing and bioinformatics tools.

Expanding Research Expenditure in Metagenomics

  • Increasing Global R&D Investments: The surge in global R&D expenditure is a key contributor to the growth of the metagenomics market. Governments, academic institutions, and private companies are increasingly investing in metagenomic research to explore the complexities of microbial ecosystems. These investments are driven by the growing recognition of the importance of the microbiome in health and disease, environmental monitoring, and agriculture.
  • Potential for Novel Discoveries: Expanding metagenomics research offers the potential to develop novel therapies, improve pathogen detection, and enhance our understanding of microbial contributions to ecosystem functions. The increasing availability of funding supports collaborative projects and large-scale studies, driving demand for advanced sequencing technologies and bioinformatics tools for metagenomic data analysis.
  • Impact on Scientific Advancements: The expanding scope of metagenomic research, coupled with the development of more sophisticated analytical methods, is expected to accelerate the discovery of new microbial species and functional genes, thereby contributing to advancements in multiple scientific disciplines.

Sequencing Costs Continue to Decline

  • Impact of Declining Sequencing Costs: The continuous decline in sequencing costs is another crucial driver of the metagenomics market. As the price of sequencing technologies, particularly NGS, continues to decrease, it has become more feasible for researchers and institutions to conduct large-scale metagenomic studies. This affordability is particularly impactful in high-throughput sequencing, such as shotgun sequencing, which is essential for comprehensive microbiome analysis and environmental genomics.
  • Increased Access to Metagenomic Workflows: Lower sequencing costs enable broader access to metagenomic workflows, facilitating a greater number of studies and applications. This accessibility is crucial for expanding the adoption of metagenomics in both academic research and clinical settings, where cost constraints have historically limited its use.
  • Sustainability of Metagenomic Libraries: The reduction in sequencing expenses also supports the development of metagenomic libraries, which serve as valuable resources for researchers studying microbial diversity and pathogen detection. As sequencing becomes more cost-effective, the creation and maintenance of these libraries become more sustainable, further driving research in microbial ecology and functional metagenomics.
  • Challenges in Widespread Adoption: Despite these advancements, the high overall cost of metagenomics remains a significant barrier to its widespread adoption. The expenses related to sequencing equipment, reagents, and data analysis are particularly burdensome for smaller research settings, limiting their ability to fully leverage metagenomic technologies. Addressing these cost challenges is essential for the broader application of metagenomics across various scientific disciplines.

Metagenomics Industry Overview

  • Moderately Consolidated Market Structure: The metagenomics market is characterized by moderate consolidation, with a few dominant global players shaping the competitive dynamics. The market is led by a mix of specialized biotechnology companies and large conglomerates with diversified portfolios, focusing on genomics and life sciences. These key players maintain significant market share by leveraging advanced technology platforms and extensive distribution networks to drive growth and innovation within the market.
  • Leading Companies Driving Innovation: Leading companies such as Illumina, Inc., PerkinElmer Inc., QIAGEN N.V., F. Hoffmann-La Roche Ltd, and Novogene Co., Ltd are at the forefront of the metagenomics market. These companies are distinguished by their strong R&D capabilities, broad product offerings, and global reach, which enable them to remain competitive. Their strategic partnerships, acquisitions, and continuous product development contribute to their leadership positions.
  • Emerging Trends and Strategies for Success: The metagenomics market is witnessing significant advancements in next-generation sequencing (NGS) technologies, which are critical for metagenomic analysis. Companies are increasingly focusing on developing cost-effective, high-throughput sequencing platforms and expanding their bioinformatics capabilities to meet the growing demand for comprehensive metagenomic data analysis. To succeed in this evolving market, companies will need to emphasize innovation in technology and strategic collaborations to enhance their service offerings and expand their market presence. 

Metagenomics Market Leaders

  1. Illumina, Inc

  2. PerkinElmer Inc.

  3. QIAGEN N.V.

  4. F. Hoffmann-La Roche Ltd

  5. Novogene Co., Ltd

  6. *Disclaimer: Major Players sorted in no particular order
Metagenomics Market Concentration
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Metagenomics Market News

  • May 2023: Mainz Biome, a German biotech company, reported a significant research partnership with Microba Life Sciences, an Australian startup. The collaboration between these two entities aims to advance scientific exploration in the realm of biotechnology. Within this partnership, Microba and Mainz Biome are expected to initiate a pilot research endeavor jointly. The focus of this project involves leveraging Microba's pioneering metagenomic sequencing technology and advanced bioinformatic tools.
  • February 2023: Microba Life Sciences Limited reported the successful launch of their advanced testing product line, MetaXplore, to healthcare professionals in Australia. This cutting-edge product range was introduced under the reimagined brand name, Co-Biome. The MetaXplore range offers an integrated approach by combining diagnostic assessments for gastrointestinal health with comprehensive metagenomic analysis of the gut microbiome. 

Metagenomics Market Report - Table of Contents

1. INTRODUCTION

  • 1.1 Study Assumptions and Market Definition
  • 1.2 Scope of the Study

2. RESEARCH METHODOLOGY

3. EXECUTIVE SUMMARY

4. MARKET DYNAMICS

  • 4.1 Market Overview
  • 4.2 Market Drivers
    • 4.2.1 Increasing R&D Expenditure
    • 4.2.2 Declining Expenses of Sequencing
    • 4.2.3 Technological Advancements
  • 4.3 Market Restraints
    • 4.3.1 High Overall Cost of Metagenomics
  • 4.4 Porter's Five Forces Analysis
    • 4.4.1 Threat of New Entrants
    • 4.4.2 Bargaining Power of Buyers/Consumers
    • 4.4.3 Bargaining Power of Suppliers
    • 4.4.4 Threat of Substitute Products
    • 4.4.5 Intensity of Competitive Rivalry

5. MARKET SEGMENTATION (Market Size by Value - USD)

  • 5.1 By Product
    • 5.1.1 Sequencing and Data Analytics Services
    • 5.1.2 Kits and Reagents
    • 5.1.3 Other Products
  • 5.2 By Technology
    • 5.2.1 Sequencing Driven
    • 5.2.2 Function Driven
  • 5.3 By Application
    • 5.3.1 Human Health
    • 5.3.2 Environmental
    • 5.3.3 Other Applications
  • 5.4 Geography
    • 5.4.1 North America
    • 5.4.1.1 United States
    • 5.4.1.2 Canada
    • 5.4.1.3 Mexico
    • 5.4.2 Europe
    • 5.4.2.1 Germany
    • 5.4.2.2 United Kingdom
    • 5.4.2.3 France
    • 5.4.2.4 Italy
    • 5.4.2.5 Spain
    • 5.4.2.6 Rest of Europe
    • 5.4.3 Asia-Pacific
    • 5.4.3.1 China
    • 5.4.3.2 Japan
    • 5.4.3.3 India
    • 5.4.3.4 Australia
    • 5.4.3.5 South Korea
    • 5.4.3.6 Rest of Asia-Pacific
    • 5.4.4 Middle East and Africa
    • 5.4.4.1 GCC
    • 5.4.4.2 South Africa
    • 5.4.4.3 Rest of Middle East and Africa
    • 5.4.5 South America
    • 5.4.5.1 Brazil
    • 5.4.5.2 Argentina
    • 5.4.5.3 Rest of South America

6. COMPETITIVE LANDSCAPE

  • 6.1 Company Profiles
    • 6.1.1 Illumina Inc.
    • 6.1.2 QIAGEN NV
    • 6.1.3 Novogene Co. Ltd
    • 6.1.4 PerkinElmer Inc.
    • 6.1.5 F. Hoffmann-La Roche Ltd
    • 6.1.6 Thermo Fisher Scientific
    • 6.1.7 Promega Connections
    • 6.1.8 Bio-Rad Laboratories Inc.
    • 6.1.9 Merck KGaA
    • 6.1.10 BGI Group
    • 6.1.11 Eurofins Scientific
  • *List Not Exhaustive

7. MARKET OPPORTUNITIES AND FUTURE TRENDS

**Subject to Availability
**Competitive Landscape covers- Business Overview, Financials, Products and Strategies, and Recent Developments
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Metagenomics Industry Segmentation

Metagenomics deals with the study in which it acts as a molecular tool that uses sequencing technologies and bioinformatics tools to analyze DNA acquired from environmental samples.

The metagenomics market is segmented by product, technology, application, and technology. By product, the market is segmented by sequencing and data analytics services, kits, reagents, and other products. By technology, the market is segmented by sequencing-driven and function-driven. By application, the market is segmented by human health, environmental, and other applications. By geography, the market is segmented by North America, Europe, Asia-Pacific, Middle East and Africa, and South America. The market report also covers the estimated market sizes and trends for 17 different countries across major regions globally. The report offers the value (in USD) for the above segments.

By Product Sequencing and Data Analytics Services
Kits and Reagents
Other Products
By Technology Sequencing Driven
Function Driven
By Application Human Health
Environmental
Other Applications
Geography North America United States
Canada
Mexico
Europe Germany
United Kingdom
France
Italy
Spain
Rest of Europe
Asia-Pacific China
Japan
India
Australia
South Korea
Rest of Asia-Pacific
Middle East and Africa GCC
South Africa
Rest of Middle East and Africa
South America Brazil
Argentina
Rest of South America
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Metagenomics Market Research FAQs

How big is the Metagenomics Market?

The Metagenomics Market size is expected to reach USD 3.28 billion in 2025 and grow at a CAGR of 14.64% to reach USD 6.49 billion by 2030.

What is the current Metagenomics Market size?

In 2025, the Metagenomics Market size is expected to reach USD 3.28 billion.

Who are the key players in Metagenomics Market?

Illumina, Inc, PerkinElmer Inc., QIAGEN N.V., F. Hoffmann-La Roche Ltd and Novogene Co., Ltd are the major companies operating in the Metagenomics Market.

Which is the fastest growing region in Metagenomics Market?

Asia Pacific is estimated to grow at the highest CAGR over the forecast period (2025-2030).

Which region has the biggest share in Metagenomics Market?

In 2025, the North America accounts for the largest market share in Metagenomics Market.

What years does this Metagenomics Market cover, and what was the market size in 2024?

In 2024, the Metagenomics Market size was estimated at USD 2.80 billion. The report covers the Metagenomics Market historical market size for years: 2019, 2020, 2021, 2022, 2023 and 2024. The report also forecasts the Metagenomics Market size for years: 2025, 2026, 2027, 2028, 2029 and 2030.

Metagenomics Industry Report

Our comprehensive metagenomics market research provides deep insights into the rapidly evolving landscape of metagenomic sequencing and its broad applications. The report covers the latest industry trends, such as advancements in next-generation sequencing (NGS) technologies, the growing significance of microbiome analysis, and the increasing adoption of bioinformatics tools for metagenomic data analysis. We delve into critical aspects of the market, including segmentation by products, technology, and applications, ensuring a thorough understanding of the market's direction and potential. This analysis is pivotal for stakeholders looking to leverage emerging opportunities in microbial diversity, pathogen detection, and environmental genomics.

Stakeholders benefit immensely from our metagenomics market report, available in a user-friendly report pdf format. The report offers actionable insights into the market's competitive landscape, highlighting key players driving innovation in metagenomic workflows and functional metagenomics. It also includes detailed market forecasts, helping industry leaders and decision-makers navigate the dynamic environment with confidence. By providing a clear market overview, our research supports strategic planning, enabling organizations to optimize their investments in sequencing technologies and expand their influence in the growing metagenomics field.

Statistics for the 2024 Metagenomics market share, size and revenue growth rate, created by Mordor Intelligence™ Industry Reports. Metagenomics analysis includes a market forecast outlook to 2029 and historical overview. Get a sample of this industry analysis as a free report PDF download.

Metagenomics Market Report Snapshots

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Metagenomics Market Size & Share Analysis - Growth Trends & Forecasts (2025 - 2030)